summaryrefslogtreecommitdiff
path: root/networkx/algorithms/assortativity/tests/test_mixing.py
blob: 131969df6cd3501838708bf4118787ea514b3c0c (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
#!/usr/bin/env python
from nose.tools import *
from nose import SkipTest
import networkx as nx
from base_test import BaseTestAttributeMixing,BaseTestDegreeMixing


class TestDegreeMixingDict(BaseTestDegreeMixing):


    def test_degree_mixing_dict_undirected(self):
        d=nx.degree_mixing_dict(self.P4)
        d_result={1:{2:2},
                  2:{1:2,2:2},
                  }
        assert_equal(d,d_result)

    def test_degree_mixing_dict_directed(self):
        d=nx.degree_mixing_dict(self.D)
        print(d)
        d_result={1:{3:2},
                  2:{1:1,3:1},
                  3:{}
                  }
        assert_equal(d,d_result)

    def test_degree_mixing_dict_multigraph(self):
        d=nx.degree_mixing_dict(self.M)
        d_result={1:{2:1},
                  2:{1:1,3:3},
                  3:{2:3}
                  }
        assert_equal(d,d_result)


class TestDegreeMixingMatrix(BaseTestDegreeMixing):

    @classmethod
    def setupClass(cls):
        global np
        global npt
        try:
            import numpy as np
            import numpy.testing as npt

        except ImportError:
             raise SkipTest('NumPy not available.')

    def test_degree_mixing_matrix_undirected(self):
        a_result=np.array([[0,0,0],
                           [0,0,2],
                           [0,2,2]]
                          )
        a=nx.degree_mixing_matrix(self.P4,normalized=False)
        npt.assert_equal(a,a_result)
        a=nx.degree_mixing_matrix(self.P4)
        npt.assert_equal(a,a_result/float(a_result.sum()))

    def test_degree_mixing_matrix_directed(self):
        a_result=np.array([[0,0,0,0],
                           [0,0,0,2],
                           [0,1,0,1],
                           [0,0,0,0]]
                          )
        a=nx.degree_mixing_matrix(self.D,normalized=False)
        npt.assert_equal(a,a_result)
        a=nx.degree_mixing_matrix(self.D)
        npt.assert_equal(a,a_result/float(a_result.sum()))

    def test_degree_mixing_matrix_multigraph(self):
        a_result=np.array([[0,0,0,0],
                           [0,0,1,0],
                           [0,1,0,3],
                           [0,0,3,0]]
                          )
        a=nx.degree_mixing_matrix(self.M,normalized=False)
        npt.assert_equal(a,a_result)
        a=nx.degree_mixing_matrix(self.M)
        npt.assert_equal(a,a_result/float(a_result.sum()))


    def test_degree_mixing_matrix_selfloop(self):
        a_result=np.array([[0,0,0],
                           [0,0,0],
                           [0,0,2]]
                          )
        a=nx.degree_mixing_matrix(self.S,normalized=False)
        npt.assert_equal(a,a_result)
        a=nx.degree_mixing_matrix(self.S)
        npt.assert_equal(a,a_result/float(a_result.sum()))


class TestAttributeMixingDict(BaseTestAttributeMixing):

    def test_attribute_mixing_dict_undirected(self):
        d=nx.attribute_mixing_dict(self.G,'fish')
        d_result={'one':{'one':2,'red':1},
                  'two':{'two':2,'blue':1},
                  'red':{'one':1},
                  'blue':{'two':1}
                  }
        assert_equal(d,d_result)

    def test_attribute_mixing_dict_directed(self):
        d=nx.attribute_mixing_dict(self.D,'fish')
        d_result={'one':{'one':1,'red':1},
                  'two':{'two':1,'blue':1},
                  'red':{},
                  'blue':{}
                  }
        assert_equal(d,d_result)


    def test_attribute_mixing_dict_multigraph(self):
        d=nx.attribute_mixing_dict(self.M,'fish')
        d_result={'one':{'one':4},
                  'two':{'two':2},
                  }
        assert_equal(d,d_result)



class TestAttributeMixingMatrix(BaseTestAttributeMixing):
    @classmethod
    def setupClass(cls):
        global np
        global npt
        try:
            import numpy as np
            import numpy.testing as npt

        except ImportError:
             raise SkipTest('NumPy not available.')

    def test_attribute_mixing_matrix_undirected(self):
        mapping={'one':0,'two':1,'red':2,'blue':3}
        a_result=np.array([[2,0,1,0],
                           [0,2,0,1],
                           [1,0,0,0],
                           [0,1,0,0]]
                          )
        a=nx.attribute_mixing_matrix(self.G,'fish',
                                         mapping=mapping,
                                         normalized=False)
        npt.assert_equal(a,a_result)
        a=nx.attribute_mixing_matrix(self.G,'fish',
                                         mapping=mapping)
        npt.assert_equal(a,a_result/float(a_result.sum()))

    def test_attribute_mixing_matrix_directed(self):
        mapping={'one':0,'two':1,'red':2,'blue':3}
        a_result=np.array([[1,0,1,0],
                           [0,1,0,1],
                           [0,0,0,0],
                           [0,0,0,0]]
                          )
        a=nx.attribute_mixing_matrix(self.D,'fish',
                                         mapping=mapping,
                                         normalized=False)
        npt.assert_equal(a,a_result)
        a=nx.attribute_mixing_matrix(self.D,'fish',
                                         mapping=mapping)
        npt.assert_equal(a,a_result/float(a_result.sum()))

    def test_attribute_mixing_matrix_multigraph(self):
        mapping={'one':0,'two':1,'red':2,'blue':3}
        a_result=np.array([[4,0,0,0],
                           [0,2,0,0],
                           [0,0,0,0],
                           [0,0,0,0]]
                          )
        a=nx.attribute_mixing_matrix(self.M,'fish',
                                         mapping=mapping,
                                         normalized=False)
        npt.assert_equal(a,a_result)
        a=nx.attribute_mixing_matrix(self.M,'fish',
                                         mapping=mapping)
        npt.assert_equal(a,a_result/float(a_result.sum()))