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+
+USAGE:
+
+ ThisIsAVeryLongProgramNameDesignedToTestSpacePrintWhichUsedToHaveProblem
+ sWithLongProgramNamesIThinkItIsNowL
+ ongEnough [-l <int>] [-u <float
+ lte 1>] [-b <float lte 1>] [-z
+ <filename>] [-x <filename>] [-s
+ <name string>] [-d] [-g <negative
+ int>] [-f <negative int>] -n <homer
+ |marge|bart|lisa|maggie> ... [--]
+ [--version] [-h] <1|2|3> ...
+
+
+Where:
+
+ -l <int>, --limit <int>
+ Max number of alignments allowed
+
+ -u <float lte 1>, --upperBound <float lte 1>
+ upper percentage bound
+
+ -b <float lte 1>, --lowerBound <float lte 1>
+ lower percentage bound
+
+ -z <filename>, --filename2 <filename>
+ Sequence 2 filename (FASTA format)
+
+ -x <filename>, --filename1 <filename>
+ Sequence 1 filename (FASTA format)
+
+ -s <name string>, --scoring--Matrix <name string>
+ Scoring Matrix name
+
+ -d, --isDna
+ The input sequences are DNA
+
+ -g <negative int>, --gap-Extend <negative int>
+ The cost for each extension of a gap
+
+ -f <negative int>, --gapCreate <negative int>
+ The cost of creating a gap
+
+ -n <homer|marge|bart|lisa|maggie>, --name <homer|marge|bart|lisa
+ |maggie> (accepted multiple times)
+ (required) Name to print. This is a long, nonsensical message to test
+ line wrapping. Hopefully it works.
+
+ --, --ignore_rest
+ Ignores the rest of the labeled arguments following this flag.
+
+ --version
+ Displays version information and exits.
+
+ -h, --help
+ Displays usage information and exits.
+
+ <1|2|3> (accepted multiple times)
+ Number of times to print
+
+
+ Command description message. This is a long multi-line message meant to
+ test line wrapping. This is more text that doesn't really do anything
+ besides take up lots of space that otherwise might be used for something
+ real. That should be enough, don't you think?
+