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This test stopped being fit for purpose after an accidental edit made it
no longer check the stratum build depends.
However, rather than fixing it, it should be removed, since we're
changing morph's behaviour to not support morphologies in different
repositories, which means that updating these refs is no longer
necessary.
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This makes petrify much simpler, since adding unpetrify-ref is handled
by MorphSet.
This has the side-effect of adding unpetrify-ref when editing, but this
information is also useful for this use-case.
The edit tests now have different diffs and commits, so those have been
updated.
Also, the old merge code currently warns that now there appears to be
petrified changes, since it detects if a branch is petrified by the
presence of the unpetrify-ref field, even though the ref is not a SHA1.
The old code does not handle undoing an edit the new way, so I did not
feel it was worth attempting to comprehend it to fix this bug, which
will be later fixed by the introduction of the new merge code.
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This also amends the test suite.
The git apply command to alter the stratum proved inflexible when
anything changed, so it has been replaced by a small in-line python
script.
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They were missing build depends or were empty.
Now that edit does validation, this is not permitted.
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I shouldn't be doing this in the middle of refactoring, but trying to
get the new code to emit exactly the right kind of JSON is too much pain,
and these tests need to be rewritten to use YAML in the near future anyway
(we'll drop JSON support eventually), so I don't want to spend more time
on this than necessary.
The changes in this commit convert morphologies in JSON to YAML, and
fix test code that modifies the morphologies to work with the YAML.
There is probably more JSON lurking about.
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The code took some refactoring. The core functionality is now all inside
one function with make_available() separate, as this is used other places.
The code is still far from perfect, but will hopefully be rewritten to
use the new abstractions of system branches etc. soon
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