This change now updates the `lru_window` variable to match the current
file's MRU window. This makes it such that it doesn't always choose the
file that happened to come last in the list of window files, and instead
should now correctly choose the file with the least-recently-used one.

Clarify the `git_atomic` type and functions now that we have a 64 bit
version as well (`git_atomic64`).

This change fixes a packfile heap corruption that can happen when
interacting with multiple packfiles concurrently across multiple
threads. This is exacerbated by setting a lower mwindow open file limit.

This change:

* Renames most of the internal methods in pack.c to clearly indicate
  that they expect to be called with a certain lock held, making
  reasoning about the state of locks a bit easier.
* Splits the `git_pack_file` lock in two: the one in `git_pack_file`
  only protects the `index_map`. The protection to `git_mwindow_file` is
  now in that struct.
* Explicitly checks for freshness of the `git_pack_file` in
  `git_packfile_unpack_header`: this allows the mwindow implementation
  to close files whenever there is enough cache pressure, and
  `git_packfile_unpack_header` will reopen the packfile if needed.
* After a call to `p_munmap()`, the `data` and `len` fields are poisoned
  with `NULL` to make use-after-frees more evident and crash rather than
  being open to the possibility of heap corruption.
* Adds a test case to prevent this from regressing in the future.

Fixes: #5591

Provide a mechanism for system components to register for initialization
and shutdown of the libgit2 runtime.

Move the mwindow mutex into the mwindow code itself, initializing it in
the mwindow global initialization function instead of in the global
initializer.