The underlying machinery used by "ls-files -o" and other commands
have been taught not to create empty submodule ref cache for a
directory that is not a submodule.  This removes a ton of wasted
CPU cycles.

* jk/ref-cache-non-repository-optim:
  resolve_gitlink_ref: ignore non-repository paths
  clean: make is_git_repository a public function

A few options of "git diff" did not work well when the command was
run from a subdirectory.

* nd/diff-with-path-params:
  diff: make -O and --output work in subdirectory
  diff-no-index: do not take a redundant prefix argument

"git tag" started listing a tag "foo" as "tags/foo" when a branch
named "foo" exists in the same repository; remove this unnecessary
disambiguation, which is a regression introduced in v2.7.0.

* jk/list-tag-2.7-regression:
  tag: do not show ambiguous tag names as "tags/foo"
  t6300: use test_atom for some un-modern tests

Many codepaths that run "gc --auto" before exiting kept packfiles
mapped and left the file descriptors to them open, which was not
friendly to systems that cannot remove files that are open.  They
now close the packs before doing so.

* js/close-packs-before-gc:
  receive-pack: release pack files before garbage-collecting
  merge: release pack files before garbage-collecting
  am: release pack files before garbage-collecting
  fetch: release pack files before garbage-collecting

Some codepaths used fopen(3) when opening a fixed path in $GIT_DIR
(e.g. COMMIT_EDITMSG) that is meant to be left after the command is
done.  This however did not work well if the repository is set to
be shared with core.sharedRepository and the umask of the previous
user is tighter.  They have been made to work better by calling
unlink(2) and retrying after fopen(3) fails with EPERM.

* js/fopen-harder:
  Handle more file writes correctly in shared repos
  commit: allow editing the commit message even in shared repos

A few unportable C construct have been spotted by clang compiler
and have been fixed.

* jk/clang-pedantic:
  bswap: add NO_UNALIGNED_LOADS define
  avoid shifting signed integers 31 bits

Since b7cc53e9 (tag.c: use 'ref-filter' APIs, 2015-07-11),
git-tag has started showing tags with ambiguous names (i.e.,
when both "heads/foo" and "tags/foo" exists) as "tags/foo"
instead of just "foo". This is both:

  - pointless; the output of "git tag" includes only
    refs/tags, so we know that "foo" means the one in
    "refs/tags".

and

  - ambiguous; in the original output, we know that the line
    "foo" means that "refs/tags/foo" exists. In the new
    output, it is unclear whether we mean "refs/tags/foo" or
    "refs/tags/tags/foo".

The reason this happens is that commit b7cc53e9 switched
git-tag to use ref-filter's "%(refname:short)" output
formatting, which was adapted from for-each-ref. This more
general code does not know that we care only about tags, and
uses shorten_unambiguous_ref to get the short-name. We need
to tell it that we care only about "refs/tags/", and it
should shorten with respect to that value.

In theory, the ref-filter code could figure this out by us
passing FILTER_REFS_TAGS. But there are two complications
there:

  1. The handling of refname:short is deep in formatting
     code that does not even have our ref_filter struct, let
     alone the arguments to the filter_ref struct.

  2. In git v2.7.0, we expose the formatting language to the
     user. If we follow this path, it will mean that
     "%(refname:short)" behaves differently for "tag" versus
     "for-each-ref" (including "for-each-ref refs/tags/"),
     which can lead to confusion.

Instead, let's add a new modifier to the formatting
language, "strip", to remove a specific set of prefix
components. This fixes "git tag", and lets users invoke the
same behavior from their own custom formats (for "tag" or
"for-each-ref") while leaving ":short" with its same
consistent meaning in all places.

We introduce a test in t7004 for "git tag", which fails
without this patch. We also add a similar test in t3203 for
"git branch", which does not actually fail. But since it is
likely that "branch" will eventually use the same formatting
code, the test helps defend against future regressions.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>

We have always had is_git_directory(), for looking at a
specific directory to see if it contains a git repo. In
0179ca7 (clean: improve performance when removing lots of
directories, 2015-06-15), we added is_git_repository() which
checks for a non-bare repository by looking at its ".git"
entry.

However, the fix in 0179ca7 needs to be applied other
places, too. Let's make this new helper globally available.
We need to give it a better name, though, to avoid confusion
with is_git_directory(). This patch does that, documents
both functions with a comment to reduce confusion, and
removes the clean-specific references in the comments.

Based-on-a-patch-by: Andreas Krey <a.krey@gmx.de>
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>

Prefix is already set up in "revs". The same prefix should be used for
all options parsing. So kill the last argument. This patch does not
actually change anything because the only caller does use the same
prefix for init_revisions() and diff_no_index().

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>